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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: acd-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPTLSPNYR NEAFEHDDSY LVNFVAGSSS GESSTPPPSF VPKCNFRYNQ SRSQMIIEVP  60
   61 VAQLKKLRKL EGTVSIKRET QHFCETTTMH GPKRIFQGKR WATLFWLIMV SCSLGLLITQ 120
  121 VFILASEYLS KPTVSDVSFL INEDGMDFPL ITICNLNPIR KTYVNEINKT GEVSPPMINY 180
  181 MMKWFTEIPT LIGGADRPTL HEGNEELKLY MKNHLNFTVD SFFMNSGFSC PDIFKLCSFQ 240
  241 GEIFDCCTLS TEVLTPLGKC FTLDLSSSTK ASMHKQTEPG IQAGLAITLD AHLEEQFDGS 300
  301 NGMDALFTNS FVNGFRYFVH PPNTIPHLSS DEFTVSPNTV AFSAISSDRY VLLPTHQWGN 360
  361 CTENFPDGIQ SNLSYSSGNC LSLCKAKFYM ENCGCTPALY NIENNLKECT PYETTTCLDN 420
  421 ILAKPNKETG KIEFQTPNCK ACAQQCNSLV YRAYNSYGSQ FSAGAFHYLK SINPEWTDGH 480
  481 MRANFQMINI FYRDMSYTEY NQVQDASVTQ LLSDIGGNMG MFLGMSVITI TEICLFFSKM 540
  541 FWLGFSKKRR DYMYSKRVNE KTHEREVCET VEKMKAIASQ GNLSSIAGTT SAKNSIPNDN 600
  601 VEFRINLKDL ADQLDSDSGY SQNQPDSRNA SFQKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle