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Protein Overview: gei-4

General Information:
Name(s) found: gei-4 / CE37419 [WormBase]
Description(s) found:
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  • WBGene00001561 locus:gei-4 status:Confirmed UniProt:Q65CL5 protein_id:CCD72890.1 [WormBase]
  • gi|71992215|ref|NP_001022811.1| GEX Interacting protein family member (gei-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|51988130|gb|AAU20837.1| Gex interacting protein protein 4, isoform f [Caenorhabditis elegans] [NCBI NR]
  • Gex interacting protein protein 4, isoform f [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed TR:Q65CL5 protein_id:AAU20837.1 [wormpep150.fasta]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed protein_id:AAU20837.1 [wormpep132.fasta]
  • 37419 WBGene00001561 locus:gei-4 status:Confirmed TR:Q65CL5 protein_id:AAU20837.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed UniProt:Q65CL5_CAEEL protein_id:AAU20837.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed UniProt:Q65CL5_CAEEL protein_id:AAU20837.1| [wormORF-contam.fasta]
  • GEX Interacting protein family member (gei-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed UniProt:Q65CL5 protein_id:AAU20837.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37419 WBGene00001561 locus:gei-4 status:Confirmed UniProt:Q65CL5 protein_id:CCD72890.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2L0F6, GEX Interacting protein OS=Caenorhabditis elegans GN=gei-4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 564 amino acids

    Gene Ontology:
    Cellular Component: intermediate filament [IDA]
    Biological Process: embryonic development [IMP]
    hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    intermediate filament organization [IMP]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: protein binding [IDA]
    structural constituent of cytoskeleton [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQNIQYTYS SDPRSGGNQN QQLHGISQFQ QNSYQPTTYS NSNANNFHSS NSATFIPNSV  60
   61 TQTPQRRMGE EKSLVNMLDA YFIDSTTPST STSWNNQQPV QMSSIQQSVG SYNQQIPQLK 120
  121 DLQVEGMNVK LSSSPDKGEK DRVKKARQAE AARMRYHRLS NEEKRELNLK RTLAQKRKRQ 180
  181 REKEMEELES ILRETNDIQE DPDITEQLRE KRMRAKWAEA ARTRYARMTP EERRAHNTRR 240
  241 RMRQMQNAMS AIKACGMATG DPQKDDEAVR LHIKTQNAKK AEAARQRYHR MNDDEKRVYN 300
  301 QRRTEAFRRR RMEEEMLLAM PIGRINGEAL DRAQQIVVRN AKRAEAARLR YQRMTPDQRK 360
  361 VAKQEPKEES WPSHEQSDTQ IDHDLDLGDS YNQKRYTPKR RRNEMDDMIS AGQMAVGSSG 420
  421 TITMGTGTPA KKDDMDALSS LERDVVKRTQ HAQQILLRQR ANQSSGTPRS VTPPPQAYII 480
  481 SNGQQQHQQL VGNQGNNGIG QHQVLHQGHM QQQQIQVSHQ QSSQSIPQNI YTSGMIIQNQ 540
  541 GQQQQGQQQQ QGQSQQILNN PYRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..412] PSI-BLAST 13.045757 Heavy meromyosin subfragment
    2 View Details [413..564] PSI-BLAST 5.045757 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle