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Protein Overview: EG13347

General Information:
Name(s) found: yagH / EG13347 [EcoGene]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • CP4-6 prophage; putative xylosidase/arabinosidase / Putative beta-xylosidase, function unknown, CP4-6; putative prophage remnant [EcoGene]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: xylan catabolic process [IEA]
    carbohydrate metabolic process [IEA]
    metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    xylan 1,4-beta-xylosidase activity [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA]
    hydrolase activity, acting on glycosyl bonds [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITNPILTG FNPDPSLCRQ GEDYYIATST FEWFPGVRIY HSRDLKNWSL VSTPLDRVSM  60
   61 LDMKGNPDSG GIWAPCLSYA DGKFWLLYTD VKIVDSPWKN GRNFLVTAPS IEGPWSEPIP 120
  121 MGNGGFDPSL FHDDDGRKYY IYRPWGPRHH SNPHNTIVLQ AFDPQTGTLS PERKTLFTGT 180
  181 PLCYTEGAHL YRHAGWYYLM AAEGGTSYEH AVVVLRSKNI DGPYELHPDV TMMTSWHLPE 240
  241 NPLQKSGHGS LLQTHTGEWY MAYLTSRPLR LPGVPLLASG GRGYCPLGRE TGIARIEWRD 300
  301 GWPYVEGGKH AQLTVKGPQV AEQPAAVPGN WRDDFDASSL DPELQTLRIP FDDTLGSLTA 360
  361 RPGFLRLYGN DSLNSTFTQS TVARRWQHFA FRAETRMEFS PVHFQQSAGL TCYYNSKNWS 420
  421 YCFVDYEEGQ GRTIKVIQLD HNVPSWPLHE QPIPVPEHAE SVWLRVDVDT LVYRYSYSFD 480
  481 GETWHTVPVT YEAWKLSDDY IGGRGFFTGA FVGLHCEDIS GDGCYADFDY FTYEPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..536] PSI-BLAST 121.0 No description for 2exhA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.395515943343317 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle