Protein Overview: IFT80_RAT

General Information:
Name(s) found:	IFT80_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|62078553\|ref\|NP_001013933.1\| intraflagellar transport 80 homolog [Rattus norvegicus] [NCBI NR] gi\|61216968\|sp\|Q66HB3.1\|IFT80_RAT RecName: Full=Intraflagellar transport protein 80 homolog; AltName: Full=WD repeat-containing protein 56 [NCBI NR] gi\|51858683\|gb\|AAH81937.1\| Intraflagellar transport 80 homolog (Chlamydomonas) [Rattus norvegicus] [NCBI NR] gi\|51858677\|gb\|AAH81931.1\| Intraflagellar transport 80 homolog (Chlamydomonas) [Rattus norvegicus] [NCBI NR] Intraflagellar transport protein 80 homolog OS=Rattus norvegicus GN=Ift80 PE=2 SV=1 [Swiss-Prot] Unknown (protein for MGC:93991) [Rattus norvegicus]gi\|51858677\|gb\|AAH81931.1\| Unknown (protein for MGC:93952) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Intraflagellar transport 80 homolog [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 WD-repeat protein 56 [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Intraflagellar transport protein 80 homolog (WD repeat-containing protein 56) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] intraflagellar transport 80 homolog [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Intraflagellar transport 80 homolog (Chlamydomonas) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 HYPOTHETICAL PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Intraflagellar transport 80 homolog (WD repeat protein 56) [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Ift80 Intraflagellar transport protein 80 homolog [rat-ipi-250309-contam.fasta] intraflagellar transport protein 80 homolog [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Intraflagellar transport protein 80 homolog OS=Rattus norvegicus GN=Ift80 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	777 amino acids
Gene Ontology:
Cellular Component:	microtubule basal body [IEA] centrosome [UNKNOWN] cytoskeleton [IEA] cytoplasm [IEA] cilium axoneme [IEA] cilium [UNKNOWN] cell projection [IEA]
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKISLLKE PKHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETSLI VKLPDDIYPI  60
   61 DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK SVEAHCGAVL AGRWNYEGTA 120
  121 LVTVGEDGQV KIWSKTGMLR STLAQQGIPV YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK 180
  181 VLQWKAHDGI ILKVDWNSVN DLILSAGEDC KYKVWDSYGR VLYGSQPHEH PITSVAWAPD 240
  241 GELFAVGSFH TLRLCDKTGW SYALEKPNTG SIFNIAWSID GTQIAGACGN GHVVFAHVVE 300
  301 QRWEWKNFQV TLTKRRTMQV RNVLNDAVDL LEFRDRVIKA SLNHAHLVVS TSLQCYVFST 360
  361 KNWNTPLIFD LKEGTVSLIL QAERHFLLVD GGGIYLHSYE GRFISSPKFP GMRTDILNAQ 420
  421 TVSLSNDTIA IKDKADEKII FLFEASTGKP LGDGKLLSHK NEISEVALDQ KGLTNDRKIA 480
  481 FIDKNRDLYI TSVKRFGKEE QIIKLGTMVH TLAWCDTCNI LCGLQDTRFT VWYYPNAVYV 540
  541 DRDILPKTLY ERDASEYSKN PHIVSFVGNQ VTVRRADGSL VHISISPYPA ILHEYVSSSK 600
  601 WEDAVRLCRF VKEQSLWACL AAMAVANRDM VTAEIAYAAV GEIDKVRYIN AMKDLPSRES 660
  661 KMAHILMFSG NIQEAETILL QAGLVYQAIQ ININLYNWER ALELAVKYKT HVDTVLAYRQ 720
  721 KFLETFGKQE TNKRYLQYAE GLQIDWEKIK AKIEMEITKE RDRSSSGQSS KNTGLKP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.94

Protein Overview: IFT80_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: