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Protein Overview: VDAC1_ARATH

General Information:
Name(s) found: VDAC1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=VDAC1 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    chloroplast envelope [IDA]
    mitochondrial outer membrane [ISS]
    vacuole [IDA]
    plasma membrane [IDA]
    plastid [IDA]
    Biological Process: response to bacterium [IEP]
    anion transport [ISS]
    Molecular Function: voltage-gated anion channel activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS  60
   61 RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD QNSGKVELQY LHEYAGISTS 120
  121 MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD 180
  181 LLNASYYHIV NPLFNTAVGA EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL 240
  241 IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] MSA 5.104993 View MSA. Confident ab initio structure predictions are available.
    2 View Details [104..276] MSA 8.104997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle