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Protein Overview: GRF5_ARATH

General Information:
Name(s) found: GRF5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30682907|ref|NP_188012.2| AtGRF5 (GROWTH-REGULATING FACTOR 5); transcription activator [Arabidopsis thaliana] [NCBI NR]
  • gi|21539888|gb|AAM52880.1| transcription activator [Arabidopsis thaliana] [NCBI NR]
  • Growth-regulating factor 5 OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=1 [Swiss-Prot]
  • transcription activator [Arabidopsis thaliana]gi|30682907|ref|NP_188012.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtGRF5 | AtGRF5 (GROWTH-REGULATING FACTOR 5) | chr3:4608533-4610167 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AtGRF5 (GROWTH-REGULATING FACTOR 5) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AtGRF5, GRF5 | growth-regulating factor 5 | chr3:4608526-4610160 FORWARD LENGTH=397 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: leaf development [TAS]
    Molecular Function: transcription activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR  60
   61 LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE AYPDSKYCEK HMHRGRNRAR 120
  121 KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG 180
  181 LGGSSSNTRG YFNSHSLDYP YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH 240
  241 KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID 300
  301 HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE 360
  361 SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] MSA 6.023971 View MSA. No confident structure predictions are available.
    2 View Details [164..238] deduced N/A No confident structure predictions are available.
    3 View Details [239..397] MSA 1.007949 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle