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View Structure Prediction Details

Protein: GRF5_ARATH
Organism: Arabidopsis thaliana
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF5_ARATH.

Description E-value Query
Range
Subject
Range
gi|11994367 - gi|11994367|dbj|BAB02326.1| unnamed protein product [Arabidopsis thaliana]
488.0 [0..1] [397..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR  60
   61 LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE AYPDSKYCEK HMHRGRNRAR 120
  121 KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SASSSSMDAY SNSNRFGLGG SSSNTRGYFN SHSLDYPYPS TSPKQQQQTL HHASALSLHQ  60
   61 NTNSTSQFNV LASAT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [239-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHKDFRYFQG IGERVGGVGE RTFFPEASRS FQDSPYHHHQ QPLATVMNDP YHHCSTDHNK  60
   61 IDHHHTYSSS SSSQHLHHDH DHRQQQCFVL GADMFNKPTR SVLANSSRQD QNQEEDEKDS 120
  121 SESSKKSLHH FFGEDWAQNK NSSDSWLDLS SHSRLDTGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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