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Protein Overview: AHL1_ARATH

General Information:
Name(s) found: AHL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|23506149|gb|AAN31086.1| At4g12080/F16J13_150 [Arabidopsis thaliana] [NCBI NR]
  • gi|22328578|ref|NP_192945.2| DNA-binding family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17979485|gb|AAL50079.1| AT4g12080/F16J13_150 [Arabidopsis thaliana] [NCBI NR]
  • gi|118420990|dbj|BAF37220.1| AT-hook motif nuclear localized protein 1 [Arabidopsis thaliana] [NCBI NR]
  • AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana GN=AHL1 PE=1 SV=1 [Swiss-Prot]
  • At4g12080/F16J13_150 [Arabidopsis thaliana]gi|17979485|gb|AAL50079.1| AT4g12080/F16J13_150 [Arabidopsis thaliana]gi|22328578|ref|NP_192945.2| DNA-binding family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | DNA-binding family protein | chr4:7239460-7241240 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g12080/F16J13_150 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g12080/F16J13_150 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT-hook motif nuclear localized protein 1 OS=Arabidopsis thaliana GN=AHL1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    mitochondrion [IDA]
    nucleolus [IDA]
    Biological Process: NONE FOUND
    Molecular Function: DNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH  60
   61 TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP DGTVVALSPK PISSAPAPSH 120
  121 LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG 180
  181 EDVTMKIISF SQQGPRSICV LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN 240
  241 DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK 300
  301 HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] FFAS03 1.13 No description for 2j63A was found.
    2 View Details [167..356] PSI-BLAST 29.69897 No description for 2nmuA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.210430303475354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle