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Protein Overview: gi|16930419, gi|...

General Information:
Name(s) found: gi|42572979 [NCBI NR]
gi|23505917 [NCBI NR]
gi|16930419 [NCBI NR]
gi|15234595 [NCBI NR]
Description(s) found:
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  • gi|42572979|ref|NP_974586.1| QQT2 (quatre-quart2); ATP binding / nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|23505917|gb|AAN28818.1| At4g21800/F17L22_260 [Arabidopsis thaliana] [NCBI NR]
  • gi|16930419|gb|AAL31895.1|AF419563_1 AT4g21800/F17L22_260 [Arabidopsis thaliana] [NCBI NR]
  • gi|15234595|ref|NP_193911.1| QQT2 (quatre-quart2); ATP binding / nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • At4g21800/F17L22_260 [Arabidopsis thaliana]gi|16930419|gb|AAL31895.1| AT4g21800/F17L22_260 [Arabidopsis thaliana]gi|42572979|ref|NP_974586.1| ATP-binding family protein [Arabidopsis thaliana]gi|15234595|ref|NP_193911.1| ATP-binding family protein [Arab [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: QQT2 | QQT2 (QUATRE-QUART2); ATP binding | chr4:11573301-11574988 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g21800/F17L22_260 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g21800/F17L22_260 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: QQT2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:11573289-11574976 FORWARD LENGTH=379 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g21800/F17L22_260 OS=Arabidopsis thaliana GN=QQT2 PE=2 SV=1 [ARATH-contam.fasta]
  • AT4g21800/F17L22_260 OS=Arabidopsis thaliana GN=QQT2 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: microtubule [IDA]
    Biological Process: embryonic development [IMP]
    cell division [IMP]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPMESSSEQ DIVEESQKLV DSLDKLRVSA ASSSSNFKKK PIIIIVVGMA GSGKTSFLHR  60
   61 LVCHTFDSKS HGYVVNLDPA VMSLPFGANI DIRDTVKYKE VMKQYNLGPN GGILTSLNLF 120
  121 ATKFDEVVSV IEKRADQLDY VLVDTPGQIE IFTWSASGAI ITEAFASTFP TVVTYVVDTP 180
  181 RSSSPITFMS NMLYACSILY KTRLPLVLAF NKTDVADHKF ALEWMEDFEV FQAAIQSDNS 240
  241 YTATLANSLS LSLYEFYRNI RSVGVSAISG AGMDGFFKAI EASAEEYMET YKADLDMRKA 300
  301 DKERLEEERK KHEMEKLRKD MESSQGGTVV LNTGLKDRDA TEKMMLEEDD EDFQVEDEED 360
  361 SDDAIDEDDE DDETKHYYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 27.30103 PAB0955 crystal structure : a GTPase in Apo form from Pyrococcus abyssi
    2 View Details [260..379] PSI-BLAST 20.39794 Initiation factor IF2/eIF5b, domains 2 and 4; Initiation factor IF2/eIF5b, domain 3; Initiation factor IF2/eIF5b, N-terminal (G) domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle