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Protein Overview: APC2_ARATH

General Information:
Name(s) found: APC2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30678127|ref|NP_178543.2| APC2; ubiquitin protein ligase binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|23429518|gb|AAN10196.1| APC2 [Arabidopsis thaliana] [NCBI NR]
  • Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana GN=APC2 PE=1 SV=1 [Swiss-Prot]
  • APC2 [Arabidopsis thaliana]gi|30678127|ref|NP_178543.2| E3 ubiquitin ligase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: APC2 | APC2 (anaphase-promoting complex/cyclosome 2); ubiquitin-protein ligase | chr2:1624930-1629036 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • APC2; ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • APC2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: APC2 | anaphase-promoting complex/cyclosome 2 | chr2:1624933-1629039 FORWARD LENGTH=865 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 865 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [TAS]
    Biological Process: ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    ubiquitin protein ligase binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC  60
   61 KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH HNYGEEIQIV LCKALEEISI 120
  121 EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI 180
  181 LHWYFKERLE ELSAIMDGDG IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV 240
  241 KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL 300
  301 QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL 360
  361 QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE SFISSLKYRL LTAGASTNDI 420
  421 LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP 480
  481 GDSLLEELMR DEESQENVGF DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL 540
  541 GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN 600
  601 DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL 660
  661 SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV SPTHAAIIMQ FQEKKSWTYK 720
  721 DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE 780
  781 EEGETSIASV EDQLRKEMTI YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ 840
  841 LQSFLSGLVS EEKLEFRDGM YLLKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..865] PSI-BLAST 152.0 Crystal Structure of The Cand1-Cul1-Roc1 Complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle