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Protein Overview: gi|7494188

General Information:
Name(s) found: gi|7494188 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||T18421 hypothetical protein C0140c - malaria parasite (Plasmodium falciparum) [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 783 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ER to Golgi vesicle-mediated transport [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTNLQCCKL QSQELALTNC GFINIGLYNN LKKSVKSNDV YSEVGNMVLI LRGDGNIGRE  60
   61 EIALNTCQRE FSRIQLKELV EINILDKENK NDLVNFIPID SIELEVNLFV KPDRLIEMED 120
  121 EKLEDVFKKY FLNHILTKGQ ILALKYNDIL LKCIVKDLKT ADFDEIKRLN NSNNNNNNRN 180
  181 SSGFSGYFNK WSPGFNNADN QNLSYNRYER GILFENTECI FTSISDGGKL CIESKKVLKQ 240
  241 NIIKNNFNFE ELGIGALDEE FKTIFRRTFA SRIYPNYIIK QLSIKHVKGM ILYGPPGTGK 300
  301 TLIARQIGKT LNAREPKIIN GPEILNKYVG QSEENIRNLF KDAEMEYKQS GENSLLHIII 360
  361 LDEIDAICRQ RGNVGSSSTG VNDSVVNQLL SKIDGVNSLN NILLIGMTNR IDLIDEALLR 420
  421 PGRFELHIEI SLPNKEGRIQ ILNIHTKNMR MSNKLSSDVN ILELAERTPN FSGAEIEGLV 480
  481 RNTVSYAFER HINFNDLTKP INADDIMITK NDFMKALKET KPAFGAEEDI IGNLLCNGII 540
  541 NYGKEYENIE NTCKLLIKQI VDNENTKLMS ILLYGENGSG KTTISAYIAK CANFHFTKFI 600
  601 TPENLIGYSE IGRINYINKI FEDAYKTPLS LVILDNIERL IDYTRIGPRF SNSILQAIMV 660
  661 LIKKKPKKEN QKILIICTTS EYQFMKDVGL TKNFFVNIHV PLLSTSSSIK NVLQHRNQTY 720
  721 HDFPNNEIEK VISSNIIKNI AIKNLLMIID MASEASDDKN ITSDVFLKIF NDCGLLLDDD 780
  781 TDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 6.522879 N-terminal domain of NSF-N, NSF-Nn; C-terminal domain of NSF-N, NSF-Nc
    2 View Details [74..783] PSI-BLAST 108.0 VCP/p97

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.48465650907586 bayes_pls_golite062009
  • catalytic activity
    		•  1.17990683373825 bayes_pls_golite062009
  • protein binding
    		•  0.427072061012472 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle