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Protein Overview: gi|113594635, gi...

General Information:
Name(s) found: gi|34897900 [NCBI NR]
gi|125595807 [NCBI NR]
gi|115465992 [NCBI NR]
gi|113594635 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • ref|NP_910296.1| EST AU082058(C12976) corresponds to a region of the predicted gene.~Similar to Arabidopsis thaliana putative transcription factor (AF062916) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125595807|gb|EAZ35587.1| hypothetical protein OsJ_19874 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115465992|ref|NP_001056595.1| Os06g0112700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113594635|dbj|BAF18509.1| Os06g0112700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCEQD ADVKKGPWTP EEDKLLVEYI GKNGHGSWRR LPKLAGLNRC GKSCRLRWTN  60
   61 YLRPDIKRGG FSDDEERLII HLHATLGNKW SSIATKLKGR TDNEIKNYWN THLRKKLLSQ 120
  121 GIDPVTHRPR TDLLAGLPNL LAAANLGGAA HQLPLDLNAI KLQADAAKFQ ILQGLLRVLA 180
  181 STTAPPPTAA VLPGTDLMTS ILGATLAANS AGILGQQQQL AGVDLSRLGQ YNGNYDNLPP 240
  241 LTNDSCTQQT QPAMSSMSPD SLLNRISSGI SGDMLGSPEL CHGGDGLSSP ELGQGGPSAS 300
  301 NMTTSPMAPP PPMVAADDHQ CNTNTPSGGG DGMSCEQTPA SSTFDGLNLD DIDMEGCWAM 360
  361 TDILLAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 36.69897 c-Myb, DNA-binding domain
    2 View Details [122..217] deduced N/A No confident structure predictions are available.
    3 View Details [218..367] MSA 6.356997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle