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Protein Overview: gi|8468012, gi|3...

General Information:
Name(s) found: gi|8468012 [NCBI NR]
gi|34894326 [NCBI NR]
gi|27368863 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|8468012|dbj|BAA96612.1| putative CjMDR1 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|34894326|ref|NP_908488.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|27368863|emb|CAD59589.1| MDR-like ABC transporter [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1285 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESWRDAEA NASSSASVAA ADSSPGNGKG GGGGGGAAVA RGERAASASA SARVPFHKLF  60
   61 AFADKTDAAL MALGTLGAVA NGAALPFMTV LFGNLIDAFG GAMGIHDVVN RVSMVSLEFI 120
  121 YLAIASAVAS FVQVTCWMIT GERQAARIRN LYLKTILRQE IAFFDKYTNT GEVVGRMSGD 180
  181 TVLIQDAMGE KVGKFIQLVV TFLGGFIVAF AQGWLLTLVM MATIPPLVVA GAVMSNVVAK 240
  241 MASLGQAAYA ESSVVVEQTI GSIRTVASFT GEKQAVEKYN KSLKSAYKSG VREGLAAGLG 300
  301 MGTVMVLLFC GYSLGIWYGA KLILLKGYTG AKVMNVIFAV LTGSLALGQA SPSMKAFAGG 360
  361 QAAAYKMFET INRKPEIDAY STTGMKPDDI RGDIEFRDVY FSYPTRPDEQ IFRGFSLSIP 420
  421 SGTTVALVGQ SGSGKSTVIS LIERFYDPQL GDVLIDGVNL KEFQLRWIRS KIGLVSQEPV 480
  481 LFAASIKENI AYGKDNATDQ EIRAAAELAN ASKFIDKMPQ GLDTSVGEHG TQLSGGQKQR 540
  541 IAIARAILKD PRILLLDEAT SALDAESERI VQEALDRVMT NRTTVIVAHR LSTVRNADTI 600
  601 AVIHQGTLVE KGPHHELLKD PEGAYSQLIK LQEANRQDKS DRKGDSGARS GKQLSINQSA 660
  661 SRSRRSSRDN SHHSFSVPFG MPLGIDIQDG SSDNLCDGMP QDVPLSRLAS LNKPEIPVLI 720
  721 LGSIASVISG VIFPIFAILL SNVIKAFYEP PHLLRKDSQF WSSMFLVFGA VYFLSLPVSS 780
  781 YLFSIAGCRL IKRIRLMTFE KVVNMEIEWF DHPENSSGAI GARLSADAAK VRGLVGDALQ 840
  841 LVVQNTTTLI AGLVIAFVSN WELSLIILAL IPLIGLNGWI QMKFIQGFSA DAKMMYEEAS 900
  901 QVANDAVSSI RTVVSFSAEE KVMDLYKKKC EGPLRTGIRT GIISGIGFGV SFFLLFGVYA 960
  961 ASFYAGARLV EENKTTFPKV FRVFLALAMA AIGVSQSSTL TSDSSKAKSA VSSIFAIVDR1020
 1021 KSRIDPSEDA GVTVETLHGN IEFQHVSFRY PTRPDVEIFR DLCLTIHSGK TVALVGESGS1080
 1081 GKSTAISLLQ RFYDPDVGHI LLDGVDIQKF QLKWLRQQMG LVSQEPALFN DTVRANIAYG1140
 1141 KEGEATESEI IEAAKLANAH KFISSSHQGY GTTVGERGAQ LSGGQKQRIA IARAIVKDPK1200
 1201 ILLLDEATSA LDAESERVVQ DALDRVMVNR TTVIVAHRLS TIQNADLIAV VKNGVIIEKG1260
 1261 KHDTLMNIKD GAYASLVALH SAASS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..635] PSI-BLAST 151.0 No description for 3b5wA was found.
    2 View Details [636..1285] PSI-BLAST 154.0 No description for 3b5xA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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