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Protein Overview: GGAP1_ARATH

General Information:
Name(s) found: GGAP1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30387535|gb|AAP31933.1| At4g26850 [Arabidopsis thaliana] [NCBI NR]
  • gi|20260478|gb|AAM13137.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18416877|ref|NP_567759.1| VTC2 (vitamin c defective 2); GDP-D-glucose phosphorylase/ GDP-galactose:glucose-1-phosphate guanyltransferase/ GDP-galactose:mannose-1-phosphate guanyltransferase/ GDP-galactose:myoinositol-1-phosphate guanyltransferase/ gala [NCBI NR]
  • gi|110740888|dbj|BAE98540.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana GN=VTC2 PE=1 SV=1 [Swiss-Prot]
  • At4g26850 [Arabidopsis thaliana]gi|20260478|gb|AAM13137.1| putative protein [Arabidopsis thaliana]gi|18416877|ref|NP_567759.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: VTC2 | VTC2 (VITAMIN C DEFECTIVE 2) | chr4:13499268-13501151 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g26850 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • VTC2 (VITAMIN C DEFECTIVE 2) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VTC2 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase | chr4:13499262-13501145 REVERSE LENGTH=442 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: callose deposition in cell wall during defense response [IMP]
    response to heat [IMP]
    response to jasmonic acid stimulus [IEP]
    L-ascorbic acid biosynthetic process [IMP]
    defense response to bacterium [IMP]
    Molecular Function: GDP-galactose:mannose-1-phosphate guanyltransferase activity [IDA]
    GDP-galactose:myoinositol-1-phosphate guanyltransferase activity [IDA]
    GDP-galactose:glucose-1-phosphate guanyltransferase activity [IDA]
    mannose-1-phosphate guanylyltransferase (GDP) activity [IDA]
    quercetin 4'-O-glucosyltransferase activity [IDA]
    GDP-D-glucose phosphorylase activity [IDA]
    galactose-1-phosphate guanylyltransferase (GDP) activity [IDA]
    glucose-1-phosphate guanylyltransferase (GDP) activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIKRVPTV VSNYQKDDGA EDPVGCGRNC LGACCLNGAR LPLYACKNLV KSGEKLVISH  60
   61 EAIEPPVAFL ESLVLGEWED RFQRGLFRYD VTACETKVIP GKYGFVAQLN EGRHLKKRPT 120
  121 EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS 180
  181 PIEYGHVLLI PRVLDCLPQR IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ 240
  241 AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL 300
  301 QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE 360
  361 DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ EEDLEGTIVH QQNSSGNVNQ 420
  421 KSNRTHGGPI TNGTAAECLV LQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] FFAS03 1.2 X-ray structure of galt-like protein from arabidopsis thaliana at5g18200
    2 View Details [246..442] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle