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Protein Overview: ATG7_ARATH

General Information:
Name(s) found: ATG7_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Ubiquitin-like modifier-activating enzyme atg7 OS=Arabidopsis thaliana GN=ATG7 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 697 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: autophagy [ISS]
    leaf senescence [TAS]
    protein amino acid lipidation [ISS]
    senescence [IMP]
    Molecular Function: APG8 activating enzyme activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKETPAII LQFAPLNSSV DEGFWHSFSS LKLDKLGIDD SPISITGFYG PCGHPQVSNH  60
   61 LTLLSESLPL DEQSLIASTS HGNRNKCPVP GILYNTNTVE SFNKLDKQSL LKAEANKIWE 120
  121 DIQSGKALED PSVLPRFLVI SFADLKKWSF RYWFAFPAFV LDPPVSLIEL KPASEYFSSE 180
  181 EAESVSAACN DWRDSDLTTD VPFFLVSVSS DSKASIRHLK DLEACQGDHQ KLLFGFYDPC 240
  241 HLPSNPGWPL RNYLALIRSR WNLETVWFFC YRESRGFADL NLSLVGQASI TLSSGESAET 300
  301 VPNSVGWELN KGKRVPRSIS LANSMDPTRL AVSAVDLNLK LMRWRALPSL NLNVLSSVKC 360
  361 LLLGAGTLGC QVARTLMGWG IRNITFVDYG KVAMSNPVRQ SLYNFEDCLG RGEFKAVAAV 420
  421 KSLKQIFPAM ETSGVVMAIP MPGHPISSQE EDSVLGDCKR LSELIESHDA VFLLTDTRES 480
  481 RWLPSLLCAN ANKIAINAAL GFDSYMVMRH GAGPTSLSDD MQNLDINKTN TQRLGCYFCN 540
  541 DVVAPQDSMT DRTLDQQCTV TRPGLAPIAG ALAVELLVGV LQHPLGINAK GDNSSLSNTG 600
  601 NNDDSPLGIL PHQIRGSVSQ FSQITLLGQA SNSCTACSET VISEYRERGN SFILEAINHP 660
  661 TYLEDLTGLT ELKKAANSFN LDWEDDDTDD DDVAVDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] MSA 2.046977 View MSA. No confident structure predictions are available.
    2 View Details [165..325] deduced N/A No confident structure predictions are available.
    3 View Details [326..697] PSI-BLAST 54.69897 Molybdenum cofactor biosynthesis protein MoeB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • small protein activating enzyme activity
    		•  3.58068602287881 bayes_pls_golite062009
  • NEDD8 activating enzyme activity
    		•  2.11391077579348 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  1.84216910649062 bayes_pls_golite062009
  • binding
    		•  1.66028321721112 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.54883560427918 bayes_pls_golite062009
  • protein binding
    		•  1.40907622346701 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.31244773198273 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.27535252106053 bayes_pls_golite062009
  • catalytic activity
    		•  1.22201444897049 bayes_pls_golite062009
  • transferase activity
    		•  0.680338489823338 bayes_pls_golite062009
  • URM1 activating enzyme activity
    		•  0.207228630005671 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle