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Protein Overview: gi|23297429, gi|...

General Information:
Name(s) found: gi|23297429 [NCBI NR]
gi|18416416 [NCBI NR]
gi|14532680 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|23297429|gb|AAN12885.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18416416|ref|NP_568242.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14532680|gb|AAK64141.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 757 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLSFHDGN IFNLLHTRSQ DPSHEVDQRM QFHSSLVRRL SQEQELEGHQ GCVNALAWNS  60
   61 NGSLLISGSD DLRINIWNYS SRKLLHSIDT GHTANIFCTK FVPETSDELV VSGAGDAEVR 120
  121 LFNTSRLSGR AEDDNAIIPS ALYQCHTRRV KKLAVEPGNP NVVWSASEDG TLRQHDFRES 180
  181 TSCPPAGTAH QECRSVLLDL RSGAKRALAD PPKQTLSLKS CDISATRPHL LLVGGSDAFA 240
  241 RLYDRRMLPP LASSRKRMPP PPCVNYFCPM HLSERGRTNL HLTHVTFSPN GEEVLLSYSG 300
  301 EHVYLMNVNN GICSTGIMQY TPGDVDNLFS FSNNLHDVES PPQVSTTPQN GFHRSSNAAT 360
  361 VKKCTELVEI AKWSLEEGTD VFYAIEAANE VLDAHSNDIE SALRHECLCT RAALLLKRKW 420
  421 KNDAHMAVRD CHNARRIDAS SFKAHYYMSE ALQQLGKCKE ALDFATAAQH MNPSDADIVA 480
  481 KVESIKRDLQ AAGAEKNEET GAGTTRVLSL SDILYRSEAN SDSSHDMSRS EREDSDYDEE 540
  541 LELDIQTSLS DDEGRDTDSN SMRGSLNLRI HRVGDDKPME NTVDNASSGT ASSSQNDRTS 600
  601 YQPEGAIDMK RRYVGHCNVG TDIKQASFLG QRGEYIASGS DDGRWFIWEK QTGRLMKVLV 660
  661 GDESVLNCIQ CHPFDSVVAT SGIDNTIKIW SPTASVPSIV AGGSAGPATA NVVEVMESNQ 720
  721 QKLSRNRENP LSVELMQRFR MQEFAEGNFH PFECTQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 65.39794 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [361..512] FFAS03 5.05 No description for 2dbaA was found.
    3 View Details [513..757] PSI-BLAST 60.39794 No description for 2h9lA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle