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Protein Overview: GATP_ARATH

General Information:
Name(s) found: GATP_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Gamma-aminobutyrate transaminase POP2, mitochondrial OS=Arabidopsis thaliana GN=POP2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    plasma membrane [IDA]
    Biological Process: response to oxidative stress [IDA]
    response to organic substance [IMP]
    fruit development [IMP]
    pollen tube growth [IMP][NAS]
    pollen tube guidance [IMP]
    gamma-aminobutyric acid catabolic process [IMP]
    beta-alanine catabolic process [IMP]
    response to cadmium ion [IEP]
    glutamate decarboxylation to succinate [IMP]
    shoot system development [IMP]
    pollen tube adhesion [IMP]
    Molecular Function: zinc ion binding [IDA]
    4-aminobutyrate transaminase activity [ISS][NAS]
    4-aminobutyrate:pyruvate transaminase activity [IDA]
    cobalt ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT  60
   61 AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA LGGNEPRLVS AAVEQLNTLP 120
  121 FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE 180
  181 KKKFIARKKS YHGSTLISAS LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS 240
  241 TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV 300
  301 ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS 360
  361 HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD GVKAFASGSP IIGETRGTGL 420
  421 ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL 480
  481 ISIYGKALKA TEEKVKELKA QHKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..504] PSI-BLAST 100.0 No description for 2ordA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle