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View Structure Prediction Details

Protein: GATP_ARATH
Organism: Arabidopsis thaliana
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATP_ARATH.

Description E-value Query
Range
Subject
Range
gi|14030435 - gi|14030435|gb|AAK52899.1|AF351125_1 gamma-aminobutyrate transaminase subunit precursor [Arabidopsis...
473.0 [0..1] [504..1]

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Predicted Domain #1
Region A:
Residues: [1-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT  60
   61 AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA LGGNEPRLVS AAVEQLNTLP 120
  121 FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE 180
  181 KKKFIARKKS YHGSTLISAS LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS 240
  241 TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV 300
  301 ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS 360
  361 HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD GVKAFASGSP IIGETRGTGL 420
  421 ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL 480
  481 ISIYGKALKA TEEKVKELKA QHKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2ordA
Description: No description for 2ordA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle