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Protein Overview: gi|22135988, gi|...

General Information:
Name(s) found: gi|79328547 [NCBI NR]
gi|30689058 [NCBI NR]
gi|30023808 [NCBI NR]
gi|22135988 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|79328547|ref|NP_001031930.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30689058|ref|NP_197749.2| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30023808|gb|AAP13437.1| At5g23590 [Arabidopsis thaliana] [NCBI NR]
  • gi|22135988|gb|AAM91576.1| putative protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGFVDHYIV LGLASGEEAL KLTEKEIAKA YKLKALDLHP DKRPDDPDAH EKFQRLKTSY  60
   61 EVLKDEKARK LFDDLLRIQR EKQHKKSQVD SKRRKMMSDL EERERSAFSP NPSARAYDEE 120
  121 ERIARKLKEE IDRIRARHAK KKSGFQTPES NVDEKRKEER SGAGASVQLD KERMLKVSWE 180
  181 KSGEGYTAGR LREVFSEFGE VEDVVIRSTK KKCSALIVMA TKDGAVAATR TLCGNLSNPL 240
  241 LVVPLQKAAQ TDFLTAKKSA EAEPQSNIVG AGLQAYEDAV MQRLLQAAMD QKKRGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] PSI-BLAST 20.154902 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [167..296] PSI-BLAST 16.69897 No description for 2d9pA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.43290712732733 bayes_pls_golite062009
  • protein binding
    		•  1.5095461875158 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2131700498174 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.936798066013332 bayes_pls_golite062009
  • DNA binding
    		•  0.8788643398536 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle