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Protein Overview: ALIS5_ARATH

General Information:
Name(s) found: ALIS5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75154436|sp|Q8L8W0.1|ALIS5_ARATH RecName: Full=ALA-interacting subunit 5; Short=AtALIS5 [NCBI NR]
  • gi|21618040|gb|AAM67090.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18412377|ref|NP_565210.1| ALIS5 (ALA-Interacting Subunit 5) [Arabidopsis thaliana] [NCBI NR]
  • ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|18412377|ref|NP_565210.1| LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 LEM3 (ligand-effect modulator 3) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | chr1:29892724-29894797 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:29887831-29889904 FORWARD LENGTH=350 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    chloroplast thylakoid lumen [ISS]
    plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV  60
   61 FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ GEGDKICKRT ITVTKAMKHP 120
  121 VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF 180
  181 NDTYSFSRNS QQLLVNKKGI SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE 240
  241 DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG 300
  301 RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 5.096994 View MSA. No confident structure predictions are available.
    2 View Details [129..350] MSA 3.095972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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