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Protein Overview: gi|19310645, gi|...

General Information:
Name(s) found: gi|21593993 [NCBI NR]
gi|19310645 [NCBI NR]
gi|18395622 [NCBI NR]
gi|15028333 [NCBI NR]
Description(s) found:
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  • gi|21593993|gb|AAM65913.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|19310645|gb|AAL85053.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18395622|ref|NP_564226.1| acidic ribosomal protein P0-related [Arabidopsis thaliana] [NCBI NR]
  • gi|15028333|gb|AAK76643.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown [Arabidopsis thaliana]gi|19310645|gb|AAL85053.1| unknown protein [Arabidopsis thaliana]gi|15028333|gb|AAK76643.1| unknown protein [Arabidopsis thaliana]gi|18395622|ref|NP_564226.1| acidic ribosomal protein P0-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Acidic ribosomal protein P0-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | acidic ribosomal protein P0-related | chr1:8854150-8855753 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L10 family protein | chr1:8854163-8855766 REVERSE LENGTH=235 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g25260 OS=Arabidopsis thaliana GN=At1g25260 PE=2 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein At1g25260 OS=Arabidopsis thaliana GN=At1g25260 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [IDA]
    ribosome [ISS]
    Biological Process: ribosome biogenesis [IEA]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSKRDRPV TLSKTKKKGR EHKECIVNGI REAVEKYSSV YVFSFENMRN IKFKEFRQQF  60
   61 RHNGKFFLGS NKVMQVALGR SAEDELRSGI YKVSKLLRGD TGLLVTDMPK EEVESLFNAY 120
  121 EDSDFSRTGS IAVETVELKE GPLEQFTHEM EPLLRKLEMP VRLNKGTVEL VADFVVCEEG 180
  181 KQLSPKSAHI LRLLRMKMAT FKLNLLCRWS PSDFELYRED LSELYREDLS DVETS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] PSI-BLAST 43.221849 Ribosomal protein L10


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle