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View Structure Prediction Details

Protein: gi|19310645, gi|...
Organism: Arabidopsis thaliana
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19310645, gi|....

Description E-value Query
Range
Subject
Range
gi|45360787, gi|... - gi|45360787|ref|NP_989067.1| acidic ribosomal phosphoprotein P0 [Xenopus (Silurana) tropicalis], gi|...
246.0 [0..1] [234..1]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSKRDRPV TLSKTKKKGR EHKECIVNGI REAVEKYSSV YVFSFENMRN IKFKEFRQQF  60
   61 RHNGKFFLGS NKVMQVALGR SAEDELRSGI YKVSKLLRGD TGLLVTDMPK EEVESLFNAY 120
  121 EDSDFSRTGS IAVETVELKE GPLEQFTHEM EPLLRKLEMP VRLNKGTVEL VADFVVCEEG 180
  181 KQLSPKSAHI LRLLRMKMAT FKLNLLCRWS PSDFELYRED LSELYREDLS DVETS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.221849
Match: 1jj2G
Description: Ribosomal protein L10
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle