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Protein Overview: gi|28973403, gi|...

General Information:
Name(s) found: gi|28973403 [NCBI NR]
gi|26450493 [NCBI NR]
gi|21593919 [NCBI NR]
gi|18421342 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|28973403|gb|AAO64026.1| putative RRM-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26450493|dbj|BAC42360.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21593919|gb|AAM65884.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18421342|ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    nucleotide binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTTRSVQVN NVSDLATERE IHEFFSFSGD IEHIEIQKEF GQSRIAFVTF TDPKALEIAL  60
   61 LLSGATIVDQ IVTITRAENY VQRRETQEVR MLDNAMPLGL QESTTQTKTN MDGNSRAYVS 120
  121 KAQDVVATVL AKGSALGQDA VNKAKAFDEK HQLRANASAK VSSFDKRVGL TEKLSVGISA 180
  181 VNEKVKSVDQ KLQVSDKTMA AIFAAERKLN DTGSAVKSSR YVTAGAAWFS GAFSKVARVG 240
  241 QVAGSKTKEK FNLAVSNMSS KDTPIAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] PSI-BLAST 18.221849 No description for 2ghpA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle