YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: BASS1_ARATH

General Information:
Name(s) found: BASS1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|23197632|gb|AAN15343.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21593677|gb|AAM65644.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18412023|ref|NP_565182.1| bile acid:sodium symporter family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16648877|gb|AAL24290.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis thaliana GN=BASS1 PE=2 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|23197632|gb|AAN15343.1| Unknown protein [Arabidopsis thaliana]gi|16648877|gb|AAL24290.1| Unknown protein [Arabidopsis thaliana]gi|18412023|ref|NP_565182.1| bile acid:sodium symporter family protein [Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Bile acid:sodium symporter family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | bile acid:sodium symporter family protein | chr1:29551739-29553657 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • bile acid:sodium symporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Sodium Bile acid symporter family | chr1:29546846-29548764 REVERSE LENGTH=401 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [ISS]
    Biological Process: sodium ion transport [IEA][ISS]
    Molecular Function: bile acid:sodium symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAISLSLL NGATPLKSNS LHKSRLTPLH LRTISCSRLS YSPSSREISL KTQSTVPISC  60
   61 RRSRFDFVPR CGISSNDLPT EKKKSFGEWV EFVGEAVSTA FPIWVSLGCL LGLMRPSTFN 120
  121 WVTPNWTIVG LTITMLGMGM TLTLDDLRGA LSMPKELFAG FLLQYSVMPL SAFFVSKLLN 180
  181 LPPHYAAGLI LVGCCPGGTA SNIVTYIARG NVALSVLMTA ASTVSAVIMT PLLTAKLAKQ 240
  241 YITVDALGLL MSTLQVVLLP VLAGAFLNQY FKKLVKFVSP VMPPIAVGTV AILCGYAIGQ 300
  301 NASAILMSGK QVVLASCLLH ISGFLFGYLF SRILGIDVAS SRTISIEVGM QNSVLGVVLA 360
  361 TQHFGNPLTA VPCAVSSVCH SILGSVLAGI WRRSAPKQLE D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] FFAS03 0.964 No description for 2gy5A was found.
    2 View Details [102..319] Pfam 49.958607 No description for PF01758.7 was found. No confident structure predictions are available.
    3 View Details [320..401] MSA 10.432996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle