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Protein Overview: gi|30682054, gi|...

General Information:
Name(s) found: gi|30682054 [NCBI NR]
gi|21593288 [NCBI NR]
Description(s) found:
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  • gi|30682054|ref|NP_850789.1| ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|21593288|gb|AAM65237.1| NAM (no apical meristem)-like protein [Arabidopsis thaliana] [NCBI NR]
  • NAM (no apical meristem)-like protein [Arabidopsis thaliana]gi|30682054|ref|NP_850789.1| no apical meristem (NAM) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 No apical meristem (NAM) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ANAC079, ATNAC4, ANAC080 | ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80); transcription factor | chr5:2436135-2437323 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • NAM (no apical meristem)-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ANAC079/ANAC080; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ANAC080, NAC080 | NAC domain containing protein 80 | chr5:2436134-2437322 FORWARD LENGTH=315 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NAC domain containing protein 80 OS=Arabidopsis thaliana GN=NAC080 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9FLR3, Isoform 2 of NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY  60
   61 FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV GMKKTLVFYR GRAPKGQKTN 120
  121 WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL 180
  181 TDSSPYNDKT KTEPVYVPCF SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI 240
  241 SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP 300
  301 SPSSGPVDLE PFWNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 65.154902 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    2 View Details [170..315] MSA 1.260997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle