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View Structure Prediction Details

Protein: gi|30682054, gi|...
Organism: Arabidopsis thaliana
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30682054, gi|....

Description E-value Query
Range
Subject
Range
NAC79_ARATH - NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1
385.0 [0..1] [315..15]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY  60
   61 FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV GMKKTLVFYR GRAPKGQKTN 120
  121 WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [170-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYGTGSSLPP LTDSSPYNDK TKTEPVYVPC FSNQAETRGT ILNCFSNPSL SSIQPDFLQM  60
   61 IPLYQPQSLN ISESSNPVLT QEQSVLQAMM ENNRRQNFKT LSISQETGVS NTDNSSVFEF 120
  121 GRKRFDHQEV PSPSSGPVDL EPFWNY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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