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Protein Overview: BAM3_ARATH

General Information:
Name(s) found: BAM3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6065749|emb|CAB58423.1| beta-amylase enzyme [Arabidopsis thaliana] [NCBI NR]
  • pir||T52556 beta-amylase (EC 3.2.1.2) precursor, chloroplast [validated] - Arabidopsis thaliana [NCBI NR]
  • gi|21593185|gb|AAM65134.1| putative beta-amylase [Arabidopsis thaliana] [NCBI NR]
  • gi|18414813|ref|NP_567523.1| CT-BMY (CHLOROPLAST BETA-AMYLASE); beta-amylase [Arabidopsis thaliana] [NCBI NR]
  • Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3 [Swiss-Prot]
  • putative beta-amylase [Arabidopsis thaliana]gi|6065749|emb|CAB58423.1| beta-amylase enzyme [Arabidopsis thaliana]gi|18414813|ref|NP_567523.1| beta-amylase (CT-BMY) / 1,4-alpha-D-glucan maltohydrolase [Arabidopsis thaliana]gi|25289328|pir||T52556 beta-a [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Beta-amylase (CT-BMY) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: BMY8, BAM3, CT-BMY | CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase | chr4:9605282-9607266 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • CT-BMY; beta-amylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • beta-amylase enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative beta-amylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    Biological Process: response to cold [IEP]
    starch catabolic process [IMP][TAS]
    maltose biosynthetic process [IMP]
    Molecular Function: beta-amylase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTLNSSSS LIKRKDAKSS RNQESSSNNM TFAKMKPPTY QFQAKNSVKE MKFTHEKTFT  60
   61 PEGETLEKWE KLHVLSYPHS KNDASVPVFV MLPLDTVTMS GHLNKPRAMN ASLMALKGAG 120
  121 VEGVMVDAWW GLVEKDGPMN YNWEGYAELI QMVQKHGLKL QVVMSFHQCG GNVGDSCSIP 180
  181 LPPWVLEEIS KNPDLVYTDK SGRRNPEYIS LGCDSVPVLR GRTPIQVYSD FMRSFRERFE 240
  241 GYIGGVIAEI QVGMGPCGEL RYPSYPESNG TWRFPGIGEF QCYDKYMKSS LQAYAESIGK 300
  301 TNWGTSGPHD AGEYKNLPED TEFFRRDGTW NSEYGKFFME WYSGKLLEHG DQLLSSAKGI 360
  361 FQGSGAKLSG KVAGIHWHYN TRSHAAELTA GYYNTRNHDG YLPIAKMFNK HGVVLNFTCM 420
  421 EMKDGEQPEH ANCSPEGLVK QVQNATRQAG TELAGENALE RYDSSAFGQV VATNRSDSGN 480
  481 GLTAFTYLRM NKRLFEGQNW QQLVEFVKNM KEGGHGRRLS KEDTTGSDLY VGFVKGKIAE 540
  541 NVEEAALV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..548] PSI-BLAST 1000.0 BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle