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Protein Overview: PRS8B_ARATH

General Information:
Name(s) found: PRS8B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21593097|gb|AAM65046.1| 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19310807|gb|AAL85134.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana] [NCBI NR]
  • gi|15241241|ref|NP_197500.1| 26S proteasome AAA-ATPase subunit, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|14532682|gb|AAK64142.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana] [NCBI NR]
  • gi|110740531|dbj|BAE98371.1| 26S proteasome AAA-ATPase subunit RPT6a - like protein [Arabidopsis thaliana] [NCBI NR]
  • 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=1 SV=1 [Swiss-Prot]
  • 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis thaliana]gi|19310807|gb|AAL85134.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]gi|14532682|gb|AAK64142.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 26S proteasome AAA-ATPase subunit [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | (REGULATORY PARTICLE TRIPLE-A 6A); ATPase | chr5:6756917-6759552 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 26S proteasome AAA-ATPase subunit RPT6a - like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RPT6A; ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | AAA-type ATPase family protein | chr5:6756915-6759550 FORWARD LENGTH=419 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    proteasome regulatory particle, base subcomplex [ISS]
    Biological Process: protein catabolic process [IEA]
    ubiquitin-dependent protein catabolic process [ISS]
    Molecular Function: ATPase activity [ISS]
    nucleotide binding [IEA]
    ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVGVEARP PVTAMEETCN VKGAAAKQGE GLNKYYLQHL DELQRLQREK SYNLNRLEAQ  60
   61 RNELNSRVRM LREELQLLQE PGSYVGEVVK VMGKNKVLVK VHPEGKYVVD IDKSIDITKL 120
  121 TPSTRVALRN DSYVLHLVLP SKVDPLVNLM KVEKVPDSTY DMIGGLDQQI KEIKEVIELP 180
  181 IKHPELFESL GIAQPKGVLL YGPPGTGKTL LARAVAHHTD CTFIRVSGSE LVQKYIGEGS 240
  241 RMVRELFVMA REHAPSIIFM DEIDSIGSAR MESGSGNGDS EVQRTMLELL NQLDGFEASN 300
  301 KIKVLMATNR IDILDQALLR PGRIDRKIEF PNPNEESRFD ILKIHSRKMN LMRGIDLKKI 360
  361 AEKMNGASGA ELKAVCTEAG MFALRERRVH VTQEDFEMAV AKVMKKDTEK NMSLRKLWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..419] PSI-BLAST 84.39794 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle