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Protein Overview: gi|88011169, gi|...

General Information:
Name(s) found: gi|88011169 [NCBI NR]
gi|21554397 [NCBI NR]
gi|15219330 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|88011169|gb|ABD38912.1| At1g16740 [Arabidopsis thaliana] [NCBI NR]
  • gi|21554397|gb|AAM63502.1| ribosomal protein L20, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15219330|ref|NP_173118.1| ribosomal protein L20 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: ribosome biogenesis [ISS]
    translation [IEA][ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKEIFKLA KGFRGRAKNC IRIARERVEK ALQYSYRDRR NKKREMRGLW IERINAGSRQ  60
   61 HGVNYGNFIH GLMKENIQLN RKVLSELSMH EPYSFKALVD VSRKSFPGNK NVVQASRKVD 120
  121 ISSINA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 31.69897 No description for 2gyaO was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.97474791978241 bayes_pls_golite062009
  • structural molecule activity
    		•  9.40020164128852 bayes_pls_golite062009
  • binding
    		•  1.3135072239079 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.517171097292651 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle