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Protein Overview: gi|110738630, gi...

General Information:
Name(s) found: gi|21554272 [NCBI NR]
gi|18420309 [NCBI NR]
gi|110738630 [NCBI NR]
Description(s) found:
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  • gi|21554272|gb|AAM63347.1| putative ER lumen protein retaining receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|18420309|ref|NP_568047.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110738630|dbj|BAF01240.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • putative ER lumen protein retaining receptor [Arabidopsis thaliana]gi|18420309|ref|NP_568047.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ER lumen protein retaining receptor family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ER lumen protein retaining receptor family protein | chr4:18111420-18112971 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ER lumen protein retaining receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ER lumen protein retaining receptor family protein | chr4:18111426-18112977 FORWARD LENGTH=273 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ER lumen protein retaining receptor family protein OS=Arabidopsis thaliana GN=At4g38791 PE=2 SV=1 [ARATH-contam.fasta]
  • ER lumen protein retaining receptor family protein OS=Arabidopsis thaliana GN=At4g38790 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS]
    Biological Process: protein transport [ISS]
    protein retention in ER lumen [IEA]
    Molecular Function: ER retention sequence binding [IEA]
    receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATTKTPIH VVWSWVRRQP PKVKAFLAVV TGMAALVLLR FIVHDHDNLF VAAEAVHSIG  60
   61 ICVLIYKLMK EKTCAGLSLK SQELTAIFLA VRLYCSIVME YDIHTILDLA TLGTTLWVIF 120
  121 MIRFKLRASY MEDKDNFPLY YVLAPCVALA VFIHPSTSHN IINRISWALC VYLEAVSVLP 180
  181 QLRVMQNTKI VEPFTAHYVF ALGVARFLSC AHWVLQVVDT RGRLLVALGY GLWPSMVLIS 240
  241 EIVQTFILAD FCYYYVKSVF GGQLVLRLPS GVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] MSA 5.05499 View MSA. No confident structure predictions are available.
    2 View Details [212..273] MSA 3.052993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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