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Protein Overview: gi|21554207, gi|...

General Information:
Name(s) found: gi|21554207 [NCBI NR]
gi|18417512 [NCBI NR]
gi|15810113 [NCBI NR]
gi|14517526 [NCBI NR]
Description(s) found:
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  • gi|21554207|gb|AAM63286.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18417512|ref|NP_568306.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15810113|gb|AAL06982.1| AT5g14910/F2G14_30 [Arabidopsis thaliana] [NCBI NR]
  • gi|14517526|gb|AAK62653.1| AT5g14910/F2G14_30 [Arabidopsis thaliana] [NCBI NR]
  • unknown [Arabidopsis thaliana]gi|15810113|gb|AAL06982.1| AT5g14910/F2G14_30 [Arabidopsis thaliana]gi|14517526|gb|AAK62653.1| AT5g14910/F2G14_30 [Arabidopsis thaliana]gi|18417512|ref|NP_568306.1| heavy-metal-associated domain-containing protein [Arabido [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Heavy-metal-associated domain-containing protein, Pfam profile PF00403: Heavy-metal-associated domain [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | heavy-metal-associated domain-containing protein | chr5:4823818-4825199 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g14910/F2G14_30 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • metal ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:4823815-4825196 FORWARD LENGTH=178 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g14910/F2G14_30 OS=Arabidopsis thaliana GN=At5g14910 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR  60
   61 KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD GTLNEAAIPN VTRALQDIDG 120
  121 VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..178] FFAS03 0.989 No description for 2g9oA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle