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Protein Overview: AP4E_ARATH

General Information:
Name(s) found: AP4E_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 938 amino acids

    Gene Ontology:
    Cellular Component: membrane coat [IEA]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]
    clathrin binding [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD  60
   61 IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL LKRTGYLAVT LFLNEDHDLI 120
  121 ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA 180
  181 LHRFHRKSPS SVSHLVSNFR KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL 240
  241 KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN 300
  301 IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA 360
  361 EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD RMIDYMISIN DNHYKTEIAS 420
  421 RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL 480
  481 SAVESYLQLI SEPKLPSLFL QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK 540
  541 GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV 600
  601 ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV 660
  661 PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP ISTSLVSERE SSEIKLRLDG 720
  721 VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL 780
  781 AASLFGGSSS RTDKRSSSGG HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT 840
  841 AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP 900
  901 QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..669] PSI-BLAST 153.0 AP1 clathrin adaptor core
    2 View Details [670..730] deduced N/A No confident structure predictions are available.
    3 View Details [731..938] PSI-BLAST 7.0 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle