| Protein: | AP4E_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 938 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP4E_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
613.0 | [0..1] | [938..1] |
|
Region A: Residues: [1-669] |
1 11 21 31 41 51
| | | | | |
1 MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD 60
61 IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL LKRTGYLAVT LFLNEDHDLI 120
121 ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA 180
181 LHRFHRKSPS SVSHLVSNFR KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL 240
241 KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN 300
301 IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA 360
361 EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD RMIDYMISIN DNHYKTEIAS 420
421 RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL 480
481 SAVESYLQLI SEPKLPSLFL QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK 540
541 GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV 600
601 ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV 660
661 PTHALRFEA
|
| Detection Method: |  |
| Confidence: | 153.0 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [670-730] |
1 11 21 31 41 51
| | | | | |
1 YELPKPSVPP QASNELVPVP EPSYYSESHQ PISTSLVSER ESSEIKLRLD GVKQKWGRPS 60
61 Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [731-938] |
1 11 21 31 41 51
| | | | | |
1 QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS 60
61 RTDKRSSSGG HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG 120
121 LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP QTSKGPNTKE 180
181 ALEKDALVRQ MGVNPTSQNP TLFKDLLG
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
