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Protein Overview: SC24A_ARATH

General Information:
Name(s) found: SC24A_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1038 amino acids

    Gene Ontology:
    Cellular Component: COPII vesicle coat [IEA]
    Biological Process: transport [ISS]
    ER body organization [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTENQGYPN FPARPASSPF ASAPPPGIPP QSGGPPTGSE AVGFRPFTPS ASQPTRPFTA  60
   61 SGPPPAPPVG TMRPGQPSPF VSQIPGSRPP PPSSNSFPSP AYGPPGGAPF QRFPSPPFPT 120
  121 TQNPPQGPPP PQTLAGHLSP PMSLRPQQPM APVAMGPPPQ STTSGLPGAN AYPPATDYHM 180
  181 PARPGFQQSM PPVTPSYPGV GGSQPSFPGY PSKQVLQAPT PFQTSQGPPG PPPVSSYPPH 240
  241 TGGFAQRPNM AAQQNLHPNY APPPSNVQGL TEDFNSLSLS SIPGSLEPGL DHKSFPRPLD 300
  301 GDVEPNSFAE MYPMNCHSRY LRLTTSAIPN SQSLASRWHL PLGAVVCPLA ETPEGEEVPL 360
  361 IDFGSTGIIR CRRCRTYVNP FVTFTDSGRK WRCNICSMLN DVPGEYFSHL DATGRRMDMD 420
  421 QRPELTKGSV EIIAPTEYMV RPPMPPIYFF LIDVSISATK SGMLEVVAQT IKSCLDNLPG 480
  481 YPRTQIGFIT YDSTLHFYNM KSSLSQPQMM VVSDLDDIFV PLPDDLLVNL SESRTVVDAF 540
  541 LDSLPLMFQD NFNVESAFGP ALRAAFMVMN QLGGKLLIFQ NSLPSLGAGR LKLRGDDPRV 600
  601 YGTDKEYALR VAEDPFYKQM AADCTKFQIG INVYAFSDKY TDIASLGTLA KYTGGQVYYY 660
  661 PGFQSSVHGD KLRHELARDL TRETAWEAVM RIRCGKGIRF SSYHGNFMLR STDLLALPAV 720
  721 DCDKAYAMQL SLEETLLTSQ TVYFQVALLY TASCGERRIR VHTSVAPVVT DLGEMYRQAD 780
  781 TGSIVSLYAR LAIEKSLSAK LDDARNAIQQ KIVKALKEYR NLHAVQHRLG SRLVYPESLK 840
  841 FLPLYGLAIT KSTPLLGGPA DTSLDERCAA GFTMMALPVK KLLKLLYPNL FRVDEWLLKP 900
  901 SAAHDDFKDV LRRLPLAAES LDSRGLYIYD DGFRLVLWFG RMLSPDIAKN LLGVDFAADL 960
  961 SRVTFQEQEN GMSKKLMRLV KKLRESDPSY HPMCFLVRQG EQPREGFLLL RNLIEDQMGG1020
 1021 SSGYVDWILQ LHRQVQQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 38.69897 No description for 1y0fA was found.
    2 View Details [275..1038] PSI-BLAST 1000.0 No description for 3eh1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle