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Protein Overview: gi|42572787, gi|...

General Information:
Name(s) found: gi|42572787 [NCBI NR]
gi|30678658 [NCBI NR]
gi|23197858 [NCBI NR]
gi|17065322 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|42572787|ref|NP_974490.1| lipase class 3 family protein / calmodulin-binding heat-shock protein-related [Arabidopsis thaliana] [NCBI NR]
  • gi|30678658|ref|NP_191959.2| lipase class 3 family protein / calmodulin-binding heat-shock protein-related [Arabidopsis thaliana] [NCBI NR]
  • gi|23197858|gb|AAN15456.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17065322|gb|AAL32815.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: lipid metabolic process [IEA][ISS]
    lipid catabolic process [IEA]
    Molecular Function: calmodulin binding [ISS]
    triglyceride lipase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILCCVPVL ECVYCLGCTH WLWKKCLYSA GHESENWGLA TSDEFEPIPR ICRLILAVYE  60
   61 ENLHDPMWAP PDGYGIDPNH VILKKDYDQT EGRVTPYMIY LDHENGDVVL AIRGLNLAKE 120
  121 CDYAVLLDNK LGQTKFDGGY VHNGLLKAAM WVFEEEHVVL RELLEANPSY SLTFVGHSLG 180
  181 AGVVSLLVLF VIQNRVRLGN IERKRIRCFA IAPPRCMSLH LAVTYADVIN SVVLQDDFLP 240
  241 RTTTALENVF KSIICLPCLL CLTCLKDTFT FEERKLKDAR RLYAPGRLYH IVVRKPLRLG 300
  301 RYPPVVRTAV PVDGRFEQIV LSCNATADHA IIWIERESQR ALDLMVEEDQ VMQIPVEQKI 360
  361 VRQKSIVEDH DEEYRAAIMK AASLNIPMSP SPSYGTFHDT EEGESSAGSG MEGSPSGWSF 420
  421 KGMRRKWDQF IDCHFPVNDN SEHMIFKNQE SQALLCGQET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 46.69897 Triacylglycerol lipase
    2 View Details [283..460] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle