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Protein Overview: gi|30689034, gi|...

General Information:
Name(s) found: gi|30689034 [NCBI NR]
gi|23197642 [NCBI NR]
gi|21539445 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|30689034|ref|NP_181777.2| copper amine oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|23197642|gb|AAN15348.1| putative copper amine oxidase [Arabidopsis thaliana] [NCBI NR]
  • gi|21539445|gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 776 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: amine metabolic process [IEA]
    Molecular Function: copper ion binding [IEA][ISS]
    quinone binding [IEA]
    amine oxidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN  60
   61 TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA GANPEVRDGM RFIEVASVEP 120
  121 DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE 180
  181 VHAVTRGGHH RGRVVSSQVI PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV 240
  241 MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF 300
  301 EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI 360
  361 GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD PNEPHYRKNA FDAGEDGLGK 420
  421 NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR 480
  481 RSRRLTVSFL CTVANYEYGF YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG 540
  541 LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA 600
  601 VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL 660
  661 WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES DVVLWYVFGI THVPRLEDWP 720
  721 VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] FFAS03 1.02 Structure of USP14, a proteasome-associated deubiquitinating enzyme
    2 View Details [67..776] PSI-BLAST 1000.0 CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.17109244877078 bayes_pls_golite062009
  • copper ion binding
    		•  0.217830410174612 bayes_pls_golite062009
  • protein binding
    		•  0.174464869077499 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle