| Protein: | gi|30689034, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689034, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
991.0 | [0..1] | [776..1] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN 60
61 TAKKPA
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 2aynA |
| Description: | Structure of USP14, a proteasome-associated deubiquitinating enzyme |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [67-776] |
1 11 21 31 41 51
| | | | | |
1 NKGISVMPRT ETKHPLDPLS AAEISVAVAT VRAAGANPEV RDGMRFIEVA SVEPDKQVVA 60
61 LADAYFFPPF QPSLLPRTKS GPVIPMKLPP RRARLVVYNQ KSNETSVWIV ALSEVHAVTR 120
121 GGHHRGRVVS SQVIPDVQPP MDAAEYAECE AIVKDFPPFI EAMKRRGIED MDLVMVDPWC 180
181 VGYHSEADAP SRRLAKPLIY CRTDSDSPME NGYARPVEGI YVLVDMQNMV VIEFEDRKFV 240
241 PLPPPDPLRN YTPGESRGGV DRSDVKPLQI IQPEGPSFRV RGYFVEWQKW NFRIGFTPRE 300
301 GLVIHSVAYV DGSRGRRPVA HRLSFVEMVV PYGDPNEPHY RKNAFDAGED GLGKNAHSLK 360
361 KGCDCLGSIK YFDAHFTNFT GGVETIENCV CLHEEDHGIL WKHQDWRTGL AEVRRSRRLT 420
421 VSFLCTVANY EYGFYWHFYQ DGKIEAEVKL TGILSLGALQ PGETRKYGTT IAPGLYAPVH 480
481 QHFFIARMDM SVDCKPAEAF NQVVEVNVRV DERGENNVHN NAFYAEEKLL KSEAVAMRDC 540
541 DPLSARHWIV RNTRTVNRTG QLTGYKLVPG SNCLPLARPE AKFLRRAAFL KHNLWVTRYA 600
601 PDEKFPGGEF PNQNPRAGEG LATWVKQNRS LEESDVVLWY VFGITHVPRL EDWPVMPVEH 660
661 IGFTLMPHGF FNCSPAVDVP PNPCELETKE SEVKEVVAPK ALQTGLLSKL
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1av4A |
| Description: | CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.17109244877078 | bayes_pls_golite062009 |
| copper ion binding | 0.217830410174612 | bayes_pls_golite062009 |
| protein binding | 0.174464869077499 | bayes_pls_golite062009 |
