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Protein Overview: ESP3_ARATH

General Information:
Name(s) found: ESP3_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana GN=ESP3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1044 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: RNA splicing [NAS]
    posttranscriptional gene silencing by RNA [IMP]
    embryonic development ending in seed dormancy [NAS]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA]
    helicase activity [IEA]
    ATP-dependent RNA helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF  60
   61 AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA DDDEDEVVVE KKSSVSESRK 120
  121 SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ 180
  181 HLKDRDTART RKLTEQTLSK KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE 240
  241 LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV 300
  301 DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED 360
  361 QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV RRSLPIYTYR DQLLKAVEEH 420
  421 QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE 480
  481 VGYSIRFEDC TSDKTVLKYM TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV 540
  541 KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI 600
  601 VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ 660
  661 AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK MKSYNPRTGM ESLLITPISK 720
  721 ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI 780
  781 NFDFMDPPPA EALVKSLELL FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC 840
  841 SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST 900
  901 QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ 960
  961 KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK EYMRQVTELK PEWLIELAPH1020
 1021 YYQLKDVEDA ASKKMPKGAG KAAM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..320] PSI-BLAST 6.39794 Heavy meromyosin subfragment
    2 View Details [321..402] deduced N/A No confident structure predictions are available.
    3 View Details [403..1044] PSI-BLAST 20.09691 No description for 2p6rA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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