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Protein Overview: DAPAT_ARATH

General Information:
Name(s) found: DAPAT_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75163801|sp|Q93ZN9.1|DAPAT_ARATH RecName: Full=LL-diaminopimelate aminotransferase, chloroplastic; Short=LL-DAP-aminotransferase; Short=DAP-aminotransferase; Short=DAP-AT; Short=AtDAP-AT; AltName: Full=Protein ABERRANT GROWTH AND DEATH 2; Flags: Precur [NCBI NR]
  • gi|41323503|gb|AAR99909.1| aminotransferase AGD2 [Arabidopsis thaliana] [NCBI NR]
  • gi|21436149|gb|AAM51321.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18418270|ref|NP_567934.1| AGD2 (ABERRANT GROWTH AND DEATH 2); L,L-diaminopimelate aminotransferase/ transaminase [Arabidopsis thaliana] [NCBI NR]
  • gi|17529044|gb|AAL38732.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15912291|gb|AAL08279.1| AT4g33680/T16L1_170 [Arabidopsis thaliana] [NCBI NR]
  • LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=DAP PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|17529044|gb|AAL38732.1| unknown protein [Arabidopsis thaliana]gi|15912291|gb|AAL08279.1| AT4g33680/T16L1_170 [Arabidopsis thaliana]gi|18418270|ref|NP_567934.1| aminotransferase class I and II family protein [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aminotransferase class I and II family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2); transaminase | chr4:16171850-16174633 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aminotransferase AGD2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AGD2 (ABERRANT GROWTH AND DEATH 2); transaminase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g33680/T16L1_170 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AGD2 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:16171847-16174630 REVERSE LENGTH=461 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 461 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: lysine biosynthetic process via diaminopimelate [IGI]
    systemic acquired resistance, salicylic acid mediated signaling pathway [IMP]
    Molecular Function: L,L-diaminopimelate aminotransferase activity [IDA]
    copper ion binding [IDA]
    transaminase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTHQLVSS MISSSSSTFL APSNFNLRTR NACLPMAKRV NTCKCVATPQ EKIEYKTKVS  60
   61 RNSNMSKLQA GYLFPEIARR RSAHLLKYPD AQVISLGIGD TTEPIPEVIT SAMAKKAHEL 120
  121 STIEGYSGYG AEQGAKPLRA AIAKTFYGGL GIGDDDVFVS DGAKCDISRL QVMFGSNVTI 180
  181 AVQDPSYPAY VDSSVIMGQT GQFNTDVQKY GNIEYMRCTP ENGFFPDLST VGRTDIIFFC 240
  241 SPNNPTGAAA TREQLTQLVE FAKKNGSIIV YDSAYAMYMS DDNPRSIFEI PGAEEVAMET 300
  301 ASFSKYAGFT GVRLGWTVIP KKLLYSDGFP VAKDFNRIIC TCFNGASNIS QAGALACLTP 360
  361 EGLEAMHKVI GFYKENTNII IDTFTSLGYD VYGGKNAPYV WVHFPNQSSW DVFAEILEKT 420
  421 HVVTTPGSGF GPGGEGFVRV SAFGHRENIL EACRRFKQLY K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..461] PSI-BLAST 63.045757 No description for 2z1zA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle