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Protein Overview: RK192_ARATH

General Information:
Name(s) found: RK192_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75247671|sp|Q8RXX5.1|RK192_ARATH RecName: Full=50S ribosomal protein L19-2, chloroplastic; Flags: Precursor [NCBI NR]
  • gi|21436235|gb|AAM51256.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19347900|gb|AAL85972.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18422764|ref|NP_568677.1| ribosomal protein L19 family protein [Arabidopsis thaliana] [NCBI NR]
  • 50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|19347900|gb|AAL85972.1| unknown protein [Arabidopsis thaliana]gi|18422764|ref|NP_568677.1| ribosomal protein L19 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | ribosomal protein L19 family protein | chr5:19181659-19183291 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 50S ribosomal protein L19-2, chloroplast precursor [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L19 family protein | chr5:19164432-19166064 REVERSE LENGTH=229 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    membrane [IDA]
    chloroplast envelope [IDA]
    ribosome [ISS]
    Biological Process: ribosome biogenesis [ISS]
    translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSHLLPQ ALHMIPRTPS FSSKNLGVSS ILPRASSVNS RLSVSRVFLN HSSSNFGFAI  60
   61 DSKKRKEFIA KAEESTEGET EAVVENAVET EAEGEGEATV AAEEAKPPWK TRVKLGDIMG 120
  121 LLNKKAIEVA ETVRPVPGLR TGDIVEIKLE VPENKRRLSI YKGIVMSRQN AGIHTTIRIR 180
  181 RIIAGIGVEI VFPIYSPNIK EIKVVSHRKV RRARLYYLRD KLPRLSTFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [108..229] PSI-BLAST 40.522879 No description for 1vs6P was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle