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Protein Overview: gi|18396599, gi|...

General Information:
Name(s) found: gi|21436073 [NCBI NR]
gi|18396599 [NCBI NR]
gi|18377969 [NCBI NR]
Description(s) found:
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  • gi|21436073|gb|AAM51237.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18396599|ref|NP_566211.1| phagocytosis and cell motility protein ELMO1-related [Arabidopsis thaliana] [NCBI NR]
  • gi|18377969|gb|AAL67127.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|18377969|gb|AAL67127.1| unknown protein [Arabidopsis thaliana]gi|18396599|ref|NP_566211.1| phagocytosis and cell motility protein ELMO1-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phagocytosis and cell motility protein ELMO1-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phagocytosis and cell motility protein ELMO1-related | chr3:869486-871694 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ELMO/CED-12 family protein | chr3:869479-871687 FORWARD LENGTH=323 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ELMO/CED-12 family protein OS=Arabidopsis thaliana GN=At3g03610 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEA]
    Biological Process: phagocytosis [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATLRRRL HHGDVDGRKY ERYDATDSET LSEPLLGSSS TDNSRNEYIE ERTLEDIWEE  60
   61 ERKRQQVHWT LIFSQLIAQW AQWIAKIVFG SGSLVGRFLS LPTFGQIGTG GRLLPPPLSM 120
  121 LQEERLRNIK RRIEIPFDGS RMEHQDALRQ LWRLAYPQRE LPPLKSELWK EMGWQGTDPS 180
  181 TDFRGGGYIS LENLIFFAKT YPESFQRLLH KQDGTRAEWE YPFAVAGINI SFMLAQMLDL 240
  241 QSGKPSTIAG IRFLGFLEED EMAFDNLYCI AFQMMDAQWL ARRASYMEFN DVLKSTRAQL 300
  301 ERELALDDVS SITDLPAFNL LYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 1.05798 View MSA. No confident structure predictions are available.
    2 View Details [122..323] Pfam 92.886057 No description for PF04727.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle