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Protein Overview: GPDA2_ARATH

General Information:
Name(s) found: GPDA2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21281213|gb|AAM45126.1| putative glycerol-3-phosphate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|18405476|ref|NP_565939.1| GLY1; glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] [NCBI NR]
  • gi|15293069|gb|AAK93645.1| putative glycerol-3-phosphate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic OS=Arabidopsis thaliana GN=GLY1 PE=1 SV=1 [Swiss-Prot]
  • putative glycerol-3-phosphate dehydrogenase [Arabidopsis thaliana]gi|15293069|gb|AAK93645.1| putative glycerol-3-phosphate dehydrogenase [Arabidopsis thaliana]gi|18405476|ref|NP_565939.1| NAD-dependent glycerol-3-phosphate dehydrogenase family protein [ [nrdb_11152004_Chlamydomonas]
  • | Symbols: SFD1, GLY1 | GLY1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1); glycerol-3-phosphate dehydrogenase (NAD+) | chr2:16981185-16983319 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative glycerol-3-phosphate dehydrogenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SFD1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1); glycerol-3-phosphate dehydrogenase (NAD+)/ oxidoreductase, acting on CH-OH group of donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GLY1, SFD1 | NAD-dependent glycerol-3-phosphate dehydrogenase family protein | chr2:16974107-16976241 FORWARD LENGTH=420 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: glycerol-3-phosphate dehydrogenase complex [IEA][ISS]
    cytoplasm [IEA]
    Biological Process: glycerol-3-phosphate metabolic process [ISS]
    systemic acquired resistance [IMP]
    glycerolipid metabolic process [IMP]
    glycerolipid biosynthetic process [IMP]
    Molecular Function: glycerol-3-phosphate dehydrogenase (NAD+) activity [IGI][ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVQPACL DLHFSGKHPP LLKHNAIIVR CVSSPNVIPE ADSISGPPDI INTNRDQRKV  60
   61 VRIAWEKLVR WSRSLRAKAK TDVLERTRKV VVLGGGSFGT AMAAHVARRK EGLEVNMLVR 120
  121 DSFVCQSINE NHHNCKYFPE HKLPENVIAT TDAKAALLDA DYCLHAVPVQ FSSSFLEGIA 180
  181 DYVDPGLPFI SLSKGLELNT LRMMSQIIPI ALKNPRQPFV ALSGPSFALE LMNNLPTAMV 240
  241 VASKDKKLAN AVQQLLASSY LRINTSSDVT GVEIAGALKN VLAIAAGIVD GMNLGNNSMA 300
  301 ALVSQGCSEI RWLATKMGAK PTTITGLSGT GDIMLTCFVN LSRNRTVGVR LGSGETLDDI 360
  361 LTSMNQVAEG VATAGAVIAL AQKYNVKLPV LTAVAKIIDN ELTPTKAVLE LMNLPQIEEV 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] PSI-BLAST 4.30103 D-lactate dehydrogenase
    2 View Details [85..420] PSI-BLAST 59.69897 Crystal structure of glycerol-3-phosphate dehydrogenase (TM0378) from THERMOTOGA MARITIMA at 2.00 A resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle