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Protein Overview: NOL9_ARATH

General Information:
Name(s) found: NOL9_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42573337|ref|NP_974765.1| pre-mRNA cleavage complex-related [Arabidopsis thaliana] [NCBI NR]
  • gi|30683442|ref|NP_850805.1| pre-mRNA cleavage complex-related [Arabidopsis thaliana] [NCBI NR]
  • gi|20465981|gb|AAM20212.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17979299|gb|AAL49875.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Arabidopsis thaliana GN=At5g11010 PE=2 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|17979299|gb|AAL49875.1| unknown protein [Arabidopsis thaliana]gi|42573337|ref|NP_974765.1| pre-mRNA cleavage complex-related [Arabidopsis thaliana]gi|30683442|ref|NP_850805.1| pre-mRNA cleavage complex-related [ [nrdb_11152004_Chlamydomonas]
  • | Symbols: | pre-mRNA cleavage complex-related | chr5:3484177-3486068 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Pre-mRNA cleavage complex II protein family | chr5:3484176-3486067 FORWARD LENGTH=368 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAENKLPF IPEEWSNAAS SVSCSSLQPV IALVCGPKNS GKSTFSRNLV EVLLQRYKRV  60
   61 AYLDTDVGQP EFTAPGFLSL TIVDKSILES DWTVPCVKTP ERCFFYGDVS SKRDPKAYLR 120
  121 YVYTLFDYYQ LHFCKSSENK TELPLVINTP GWVKGIGYEL LVDVLRYVSP SHVVKINISA 180
  181 YNKNLPAGLF WLDGNDDETA HLIEIQSAYQ DRYNQSILIH KDARLMRDMR IIAYFRQCFK 240
  241 GKEVNTIKEL THELASHIPY EVPISSLTIN HLHCQIPSSE VYYSLNASIV GLGISTEVFE 300
  301 DLPSCVGLGI VRGIDTERGI LYVITPVPEN LVEKVDLLLQ GYIQLPTCLL EVKDYRSPYL 360
  361 SANVLAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 36.69897 No description for 2npiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle