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Protein Overview: gi|21281225, gi|...

General Information:
Name(s) found: gi|21281225 [NCBI NR]
gi|15238089 [NCBI NR]
gi|13430500 [NCBI NR]
Description(s) found:
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  • gi|21281225|gb|AAM44941.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238089|ref|NP_196581.1| transporter-related [Arabidopsis thaliana] [NCBI NR]
  • gi|13430500|gb|AAK25872.1|AF360162_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|13430500|gb|AAK25872.1| unknown protein [Arabidopsis thaliana]gi|15238089|ref|NP_196581.1| transporter-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transporter-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | transporter-related | chr5:3199206-3201141 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • carbohydrate transporter/ sugar porter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr5:3199205-3201140 FORWARD LENGTH=488 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Major facilitator protein OS=Arabidopsis thaliana GN=At5g10190 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSETLTLVL VYLAGIMERA DESLLPGVYK EVGDALHVDP TALGTLTLFR SIVQSSCYPL  60
   61 AAYLSSRHNR AHVIALGAFL WATATFLVAV STTFFQVAVS RGLNGIGLAI VTPAIQSLVA 120
  121 DSTDDYNRGM AFGWLGFTSN IGSILGYVCS ILFASKSFNG VAGWRIAFLL VAVVSVIVGI 180
  181 LVRLFATDPH YSDRKITKHV KDKPFWSDIR DLLKEAKMVI KIPSFQIFVA QGVSGSFPWS 240
  241 ALAFAPLWLE LIGFSHKTTA VLVTLFTISC SLGGLFGGYM GDTLAKKFPN GGRIFLSQVS 300
  301 SGSAIPLAAI LLIGLPDDPS TAFSHGLVLV IMGLCISWNG AATNGPIFAE IVPERARTSI 360
  361 YALDRSFESI LASFAPPIVG MLAQNIYGYK PIPEGSTSSV KIDTDRANAA SLAKALYTSI 420
  421 GIPMVICCTI YSFLYCTYPR DRDRAKMQAL IESEMQQLNE EEDEIEVKCF GAEEHDEAYL 480
  481 LKQHQNES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 33.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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