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Protein Overview: gi|18417824, gi|...

General Information:
Name(s) found: gi|21280841 [NCBI NR]
gi|18417824 [NCBI NR]
gi|15292961 [NCBI NR]
Description(s) found:
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  • gi|21280841|gb|AAM44918.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18417824|ref|NP_568323.1| dehydrogenase-related [Arabidopsis thaliana] [NCBI NR]
  • gi|15292961|gb|AAK93591.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|15292961|gb|AAK93591.1| unknown protein [Arabidopsis thaliana]gi|18417824|ref|NP_568323.1| dehydrogenase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dehydrogenase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | dehydrogenase-related | chr5:5193210-5195205 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:5193207-5195202 FORWARD LENGTH=269 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Dehydrogenase-related protein OS=Arabidopsis thaliana GN=At5g15910 PE=2 SV=1 [ARATH-contam.fasta]
  • NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana GN=At5g15910 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    cellular metabolic process [IEA]
    Molecular Function: coenzyme binding [IEA]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSLIWKRS QAYSSVVTMS SISQRGNERL LSEVAGSHSR DNKILVLGGN GYVGSHICKE  60
   61 ALRQGFSVSS LSRSGRSSLH DSWVDDVTWH QGDLLSPDSL KPALEGITSV ISCVGGFGSN 120
  121 SQMVRINGTA NINAVKAAAE QGVKRFVYIS AADFGVINNL IRGYFEGKRA TEAEILDKFG 180
  181 NRGSVLRPGF IHGTRQVGSI KLPLSLIGAP LEMVLKLLPK EVTKIPVIGP LLIPPVNVKS 240
  241 VAATAVKAAV DPEFASGVID VYRILQHGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 29.154902 Crystal structure of full length ArnA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle