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Protein Overview: gi|20465765, gi|...

General Information:
Name(s) found: gi|22327621 [NCBI NR]
gi|20465765 [NCBI NR]
gi|18377616 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|22327621|ref|NP_199453.2| NLI interacting factor (NIF) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20465765|gb|AAM20371.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18377616|gb|AAL66958.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYIEMKSKI SKVLGVCKKH KASTRNSCSL SKISGDLESI TAAITTCHDD EKQHPGLDTF  60
   61 SRESETNEPA EMLVEDTSQS QGFAPWVDGS QSVENMENAC NHMSNSDTIF SPVLNDELDG 120
  121 TGRVFTAGNS VIWETPRWGA DESSNKICFD NQTCNVSDFY ISDVLIASLP FDESGNNDAF 180
  181 TEISPLPHYI FPEQYMVLPY LEDGSANKDD IKSDTDKINL DNHDLFLAFN RTRSYNVEPD 240
  241 DRAESEVAED FDPQLFIKNQ PELSDVVSNY WPRDTLRKKS VTLVLDLDET LVHSTLESCN 300
  301 VADFSFRVFF NMQENTVYVR QRPHLYRFLE RVGELFHVVI FTASHSIYAS QLLDILDPDG 360
  361 KFISQRFYRD SCILLDGIYT KDLTVLGLDL AKVAIIDNCP QVYRLQINNG IPIKSWYDDP 420
  421 TDDGLITILP FLETLAVADD VRPIIGRRFG NKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] MSA 3.157996 View MSA. No confident structure predictions are available.
    2 View Details [250..453] PSI-BLAST 62.154902 Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.02290994020378 bayes_pls_golite062009
  • hydrolase activity
    		•  0.71914501009647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle