| Protein: | gi|20465765, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465765, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
433.0 | [0..1] | [453..1] |
|
Region A: Residues: [1-249] |
1 11 21 31 41 51
| | | | | |
1 MPYIEMKSKI SKVLGVCKKH KASTRNSCSL SKISGDLESI TAAITTCHDD EKQHPGLDTF 60
61 SRESETNEPA EMLVEDTSQS QGFAPWVDGS QSVENMENAC NHMSNSDTIF SPVLNDELDG 120
121 TGRVFTAGNS VIWETPRWGA DESSNKICFD NQTCNVSDFY ISDVLIASLP FDESGNNDAF 180
181 TEISPLPHYI FPEQYMVLPY LEDGSANKDD IKSDTDKINL DNHDLFLAFN RTRSYNVEPD 240
241 DRAESEVAE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-453] |
1 11 21 31 41 51
| | | | | |
1 DFDPQLFIKN QPELSDVVSN YWPRDTLRKK SVTLVLDLDE TLVHSTLESC NVADFSFRVF 60
61 FNMQENTVYV RQRPHLYRFL ERVGELFHVV IFTASHSIYA SQLLDILDPD GKFISQRFYR 120
121 DSCILLDGIY TKDLTVLGLD LAKVAIIDNC PQVYRLQINN GIPIKSWYDD PTDDGLITIL 180
181 PFLETLAVAD DVRPIIGRRF GNKE
|
| Detection Method: | |
| Confidence: | 62.154902 |
| Match: | 1ta0A |
| Description: | Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.02290994020378 | bayes_pls_golite062009 |
| hydrolase activity | 0.71914501009647 | bayes_pls_golite062009 |
