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Protein Overview: ZDS_ARATH

General Information:
Name(s) found: ZDS_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42572255|ref|NP_974222.1| ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase [Arabidopsis thaliana] [NCBI NR]
  • gi|20465501|gb|AAM20233.1| putative zeta-carotene desaturase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|18175734|gb|AAL59918.1| putative zeta-carotene desaturase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|16649101|gb|AAL24402.1| putative zeta-carotene desaturase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|15229367|ref|NP_187138.1| ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase [Arabidopsis thaliana] [NCBI NR]
  • gi|148887331|sp|Q38893.3|ZDS_ARATH RecName: Full=Zeta-carotene desaturase, chloroplastic/chromoplastic; AltName: Full=Carotene 7,8-desaturase; Flags: Precursor [NCBI NR]
  • gi|12322840|gb|AAG51402.1|AC009465_2 putative zeta-carotene desaturase precursor; 62103-58756 [Arabidopsis thaliana] [NCBI NR]
  • Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3 [Swiss-Prot]
  • putative zeta-carotene desaturase precursor [Arabidopsis thaliana]gi|18175734|gb|AAL59918.1| putative zeta-carotene desaturase precursor [Arabidopsis thaliana]gi|16649101|gb|AAL24402.1| putative zeta-carotene desaturase precursor [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zeta-carotene desaturase (ZDS1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PDE181, ZDS | ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | chr3:1342848-1346195 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative zeta-carotene desaturase precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative zeta-carotene desaturase precursor; 62103-58756 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase | chr3:1342842-1346189 FORWARD LENGTH=558 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 558 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: carotene biosynthetic process [IDA]
    Molecular Function: carotene 7,8-desaturase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVVFAAT GSLSVPPLKS RRFYVNSSLD SDVSDMSVNA PKGLFPPEPV PYKGPKLKVA  60
   61 IIGAGLAGMS TAVELLDQGH EVDIYDSRTF IGGKVGSFVD RRGNHIEMGL HVFFGCYNNL 120
  121 FRLMKKVGAE KNLLVKDHTH TFINKDGTIG ELDFRFPVGA PIHGIRAFLV TNQLKPYDKL 180
  181 RNSLALALSP VVKALVDPDG AMRDIRNLDS ISFSDWFLSK GGTRASIQRM WDPVAYALGF 240
  241 IDCDNMSARC MLTIFSLFAT KTEASLLRML KGSPDVYLSG PIKQYITDRG GRIHLRWGCR 300
  301 EILYDKSADG ETYVTGLAIS KATNKKIVKA DVYVAACDVP GIKRLLPKEW RESRFFNDIY 360
  361 ELEGVPVVTV QLRYNGWVTE LQDIELARQL KRAVGLDNLL YTPDADFSCF ADLALASPAD 420
  421 YYIEGQGTLL QCVLTPGDPY MRMPNDKIIE KVAMQVTELF PSSRGLEVTW SSVVKIAQSL 480
  481 YREAPGKDPF RPDQKTPIKN FFLAGSYTKQ DYIDSMEGAT LSGRQASSYI CDAGEELAEL 540
  541 NKKLSSSATA VPDELSLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] PSI-BLAST 10.522879 Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain
    2 View Details [69..558] PSI-BLAST 57.154902 Human Monoamine Oxidase A in complex with Clorgyline, Crystal Forma A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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