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Protein Overview: PUB14_ARATH

General Information:
Name(s) found: PUB14_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 632 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: protein ubiquitination [ISS]
    Molecular Function: ubiquitin-protein ligase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLTNCCSHE ELMSRLVDSV KEISGFSSSR GFIGKIQGDL VRRITLLSPF FEELIDVNVE  60
   61 LKKDQITGFE AMRIALDSSL ELFRSVNGGS KLFQLFDRDS LVEKFRDMTV EIEAALSQIP 120
  121 YEKIEVSEEV REQVQLLHFQ FKRAKERWEE SDLQLSHDLA MAENVMDPDP IILKRLSQEL 180
  181 QLTTIDELKK ESHAIHEYFL SYDGDPDDCF ERMSSLLKNL VDFVTMESSD PDPSTGSRIV 240
  241 SRHRSPVIPE YFRCPISLEL MKDPVIVSTG QTYERSSIQK WLDAGHKTCP KSQETLLHAG 300
  301 LTPNYVLKSL IALWCESNGI ELPQNQGSCR TTKIGGSSSS DCDRTFVLSL LEKLANGTTE 360
  361 QQRAAAGELR LLAKRNVDNR VCIAEAGAIP LLVELLSSPD PRTQEHSVTA LLNLSINEGN 420
  421 KGAIVDAGAI TDIVEVLKNG SMEARENAAA TLFSLSVIDE NKVAIGAAGA IQALISLLEE 480
  481 GTRRGKKDAA TAIFNLCIYQ GNKSRAVKGG IVDPLTRLLK DAGGGMVDEA LAILAILSTN 540
  541 QEGKTAIAEA ESIPVLVEII RTGSPRNREN AAAILWYLCI GNIERLNVAR EVGADVALKE 600
  601 LTENGTDRAK RKAASLLELI QQTEGVAVTT VP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] MSA 4.084989 View MSA. Confident ab initio structure predictions are available.
    2 View Details [148..239] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [240..331] PSI-BLAST 10.09691 NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana
    4 View Details [332..632] PSI-BLAST 9.69897 Importin beta


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle