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Protein Overview: CHLD_ARATH

General Information:
Name(s) found: CHLD_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30680676|ref|NP_563821.2| CHLD; ATP binding / magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|20259647|gb|AAM14341.1| putative Mg-chelatase [Arabidopsis thaliana] [NCBI NR]
  • gi|17380694|gb|AAL36177.1| putative Mg-chelatase [Arabidopsis thaliana] [NCBI NR]
  • gi|148886934|sp|Q9SJE1.3|CHLD_ARATH RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin IX chelatase; Flags: Precursor [NCBI NR]
  • gi|110741163|dbj|BAE98674.1| Mg-chelatase like protein [Arabidopsis thaliana] [NCBI NR]
  • Magnesium-chelatase subunit ChlD, chloroplastic OS=Arabidopsis thaliana GN=CHLD PE=1 SV=3 [Swiss-Prot]
  • putative Mg-chelatase [Arabidopsis thaliana]gi|17380694|gb|AAL36177.1| putative Mg-chelatase [Arabidopsis thaliana]gi|30680676|ref|NP_563821.2| magnesium-chelatase subunit chlD, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLD) [Ar [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Magnesium-chelatase subunit chlD [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PDE166, CHLD | CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding | chr1:2696541-2700822 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • PDE166; magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative Mg-chelatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Mg-chelatase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ALB1, ALB-1V, V157, PDE166, CHLD | ALBINA 1 | chr1:2696538-2700819 FORWARD LENGTH=760 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Magnesium-chelatase subunit ChlD, chloroplastic OS=Arabidopsis thaliana GN=CHLD PE=2 SV=3 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 760 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    magnesium chelatase complex [TAS]
    Biological Process: chlorophyll biosynthetic process [TAS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]
    magnesium chelatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN  60
   61 GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL GAVDREIGGI AISGRRGTAK 120
  121 TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI 180
  181 PLGVTEDRLI GSVDVEESVK RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT 240
  241 DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG 300
  301 IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR 360
  361 AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL DETPPEQQNQ PPPPPPPPQN 420
  421 SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR 480
  481 RGKAGRAKNV IFSEDRGRYI KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF 540
  541 VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF 600
  601 RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA 660
  661 ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG KIYKAGMSLL VIDTENKFVS 720
  721 TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 8.0 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    2 View Details [74..399] PSI-BLAST 51.69897 ATPase subunit of magnesium chelatase, BchI
    3 View Details [400..760] PSI-BLAST 14.0 No description for 2ok5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle